Alicandri E., Covino S., Sebastiani B., Paolacci A. R., Badiani M., Sorgonà A., and Ciaffi M. (2022). Monoterpene synthase genes and monoterpene profiles in Pinus nigra subsp. laricio. Plants, 11(3): 449.
Amiripoor M., Sadat-Noori S. A., Shariati J. V., and Soltani Howyzeh M. (2018). Identification of terpenoid backbone biosynthetic pathway genes in Ajowan (Trachyspermum ammi L.) by RNA-Seq. Modern Genetics Journal, 13(1): 133-141. (In Persian)
Amiripour M., Sadat Noori S. A., Shariati V., and Soltani Howyzeh M. (2019). Transcriptome analysis of Ajowan (Trachyspermum ammi L.) inflorescence. Journal of Plant Biochemistry and Biotechnology, 28(4): 496-508.
Amaeze O., Eng H., Horlbogen L., Varma M. V., and Slitt A. (2021). Cytochrome P450 enzyme inhibition and herb-drug interaction potential of medicinal plant extracts used for management of diabetes in Nigeria. European Journal of Drug Metabolism and Pharmacokinetics, 46(3): 437-450.
Amiri S., Fotovat R., Panahi B., Tarinezhad A., and Mohammadi S. A. (2020). Review of abiotic and biotic elicitors’ roles in secondary metabolites biosynthesis of periwinkle (Catharanthus roseus (L.) G. Don). Journal of Medicinal Plants, 19(74): 1-24. (In Persian)
Balusamy S. R., Rahimi S., and Yang D.-C. (2019). Characterisation of squalene-induced PgCYP736B involved in salt tolerance by modulating key genes of abscisic acid biosynthesis. International Journal of Biological Macromolecules, 121: 796-805.
Calla B., and Berenbaum M. R. (2020). Cytochrome P450s in the era of transcriptomics. In: Transcriptomics in Entomological Research, Wallingford UK: CABI, 99-112.
Christie M., Croft L. J., and Carroll B. J. (2011). Intron splicing suppresses RNA silencing in Arabidopsis. The Plant Journal, 68(1): 159-167.
Crocoll C. (2011). Biosynthesis of the phenolic monoterpenes, thymol and carvacrol, by terpene synthases and cytochrome P450s in oregano and thyme. Academic Dissertation, der Biologisch-Pharmazeutischen Fakultät der Friedrich-Schiller-Universität Jena, pp. 143.
De Alvarenga J. F. R., Genaro B., Costa B. L., Purgatto E., Manach C., and Fiamoncini, J. (2023). Monoterpenes: current knowledge on food source, metabolism, and health effects. Critical Reviews in Food Science and Nutrition, 63(10): 1352-1389.
Di Nardo G., and Gilardi G. (2020). Natural compounds as pharmaceuticals: the key role of cytochromes P450 reactivity. Trends in Biochemical Sciences, 45(6): 511-525.
Djemal R., and Khoudi H. (2019). Combination of the endogenous promoter-intron significantly improves salt and drought tolerance conferred by TdSHN1 transcription factor in transgenic tobacco. Plant Physiology and Biochemistry, 139: 435-445.
Emami S., Arumainayagam D., Korf I., and Rose A. B. (2013). The effects of a stimulating intron on the expression of heterologous genes in Arabidopsis thaliana. Plant Biotechnology Journal, 11(5): 555-563.
Froger A., and Hall J. E. (2007). Transformation of plasmid DNA into E. coli using the heat shock method. Journal of Visualised Experiments, (6): 253. DOI: 10.3791/253.
Guo L., Yao H., Chen W., Wang X., Ye P., Xu Z., Zhang S., and Wu H. (2022). Natural products of medicinal plants: biosynthesis and bioengineering in post-genomic era. Horticulture Research, 9: uhac223.
Krause S. T., Liao P., Crocoll C., Boachon B., Förster C., Leidecker F., Wiese N., Zhao D., Wood J. C., Buell C. R., Gershenzon J., Dudareva N., and Degenhardt J. (2021). The biosynthesis of thymol, carvacrol, and thymohydroquinone in Lamiaceae proceeds via cytochrome P450s and a short-chain dehydrogenase. Proceedings of the National Academy of Sciences, 118(52): e2110092118.
Kumar M., Tripathi P. K., Ayzenshtat D., Marko A., Forotan Z., and Bocobza, S. E. (2022). Increased rates of gene-editing events using a simplified RNAi configuration designed to reduce gene silencing. Plant Cell Reports, 41(10): 1987-2003.
Lanier E. R., Andersen T. B., and Hamberger B. (2023). Plant terpene specialized metabolism: complex networks or simple linear pathways?. The Plant Journal, 114(5): 1178-1201.
Mirzahosseini S. M., Sadat Noori S. A., Amanzadeh Y., Javid M. G., and Howyzeh M. S. (2017). Phytochemical assessment of some native ajowan (Therachyspermum ammi L.) ecotypes in Iran. Industrial Crops and Products, 105: 142-147.
Nawade B., Kumar A., Maurya R., Subramani R., Yadav R., Singh K., and Rangan P. (2022). Longer duration of active oil biosynthesis during seed development is crucial for high oil yield—lessons from genome-wide in silico mining and rna-seq validation in sesame. Plants, 11(21): 2980.
Nelson D., and Werck‐Reichhart D. (2011). A P450‐centric view of plant evolution. The Plant Journal, 66(1): 194-211.
Niazian M. (2019). Application of genetics and biotechnology for improving medicinal plants. Planta, 249(4): 953-973. DOI: 10.1007/s00425-019-03099-1.
Niazian M., Sadat-Noori S. A., Tohidfar M., Galuszka P., and Mortazavian S. M. M. (2019). Agrobacterium-mediated genetic transformation of ajowan (Trachyspermum ammi (L.) Sprague): an important industrial medicinal plant. Industrial Crops and Products, 132: 29-40.
Niazian M., Sadat Noori S. A., Tohidfar M., and Mortazavian S. M. M. (2017). Essential oil yield and agro-morphological traits in some iranian ecotypes of ajowan (Carum copticum L.). Journal of Essential Oil Bearing Plants, 20(4): 1151-1156. DOI: 10.1080/0972060X.2017.1326849.
Nomani M., Sadat Noori S. A., Tohidfar M., and Ramshini H. (2019). Overexpression of TPS2 gene to increase thymol content using Agrobacterium tumefaciens-mediated transformation in Trachyspermum ammi (Qom ecotype). Industrial Crops and Products, 130: 63-70.
Palatinszky M., Nikolausz M., Sváb D., and Márialigeti K. (2011). Preferential ligation during TA-cloning of multitemplate PCR products—A factor causing bias in microbial community structure analysis. Journal of Microbiological Methods, 85(2): 131-136.
Pateraki I., Heskes A. M., and Hamberger B. (2015). Cytochromes P450 for terpene functionalisation and metabolic engineering. In: Schrader J., Bohlmann J. (Eds.), Biotechnology of Isoprenoids, Advances in Biochemical Engineering/Biotechnology, Vol. 148, Springer, Cham, 107-139. DOI: https://doi.org/10.1007/10_2014_301.
Ragland D. A., Nalivaika E. A., Nalam M. N., Prachanronarong K. L., Cao H., Bandaranayake R. M., Cai Y., Kurt-Yilmaz N., and Schiffer C. A. (2014). Drug resistance conferred by mutations outside the active site through alterations in the dynamic and structural ensemble of HIV-1 protease. Journal of the American Chemical Society, 136(34): 11956-11963.
Sadat-Noori S. A., Soltani Howyzeh M., and Moradi N. (2020). Ajowan. In book: Carrots and Related Apiaceae Crops, Wallingford UK: CABI, 231-239. DOI: 10.1079/9781789240955.0231.
Sadat-Noori S. A., Niazian M., Soltani Howyzeh M., and Amiripoor M. (2018). Ajowan medicinal plant (botany, medicinal properties, agronomy, plant breeding and biotechnology). Academic Center of Education Culture and Research,Tehran Branch, ISBN: 978-600-133-307-1. (In Persian)
Sethi A., Bhandawat A., and Pati P. K. (2022). Engineering medicinal plant-derived CYPs: a promising strategy for production of high-valued secondary metabolites. Planta, 256(6): 1-14.
Sika K. C., Kefela T., Adoukonou-Sagbadja H., Ahoton L., Saidou A., Baba-Moussa L., Baptiste L. J., Kotconi S. O., and Gachomo E. W. (2015). A simple and efficient genomic DNA extraction protocol for large scale genetic analyses of plant biological systems. Plant Gene, 1: 43-45.
Singh A., Panwar R., Mittal P., Hassan M. I., and Singh I. K. (2021). Plant cytochrome P450s: Role in stress tolerance and potential applications for human welfare. International Journal of Biological Macromolecules, 184: 874-886.
Skorupski K., and Taylor R. K. (1996). Positive selection vectors for allelic exchange. Gene, 169(1): 47-52.
Soltani Howyzeh M., Sadat Noori S. A., and Shariati J. V. (2018a). Essential oil profiling of Ajowan (Trachyspermum ammi) industrial medicinal plant. Industrial Crops and Products, 119: 255-259.
Soltani Howyzeh M., Sadat Noori S. A., Shariati J. V., and Amiripour M. (2018b). Comparative transcriptome analysis to identify putative genes involved in thymol biosynthesis pathway in medicinal plant Trachyspermum ammi L. Scientific Reports, 8(1): 13405.
Soltani Howyzeh M., Sadat Noori S. A., Shariati J. V., and Niazian M. (2018c). Essential oil chemotype of Iranian ajowan (Trachyspermum ammi L.). Journal of Essential Oil Bearing Plants, 21(1): 273-276.
Trindade H., Pedro L. G., Figueiredo A. C., and Barroso J. G. (2018). Chemotypes and terpene synthase genes in Thymus genus: State of the art. Industrial Crops and Products, 124: 530-547.
Vasil V., Clancy M., Ferl R. J., Vasil I. K., and Hannah L. C. (1989). Increased gene expression by the first intron of maize shrunken-1 locus in grass species. Plant Physiology, 91(4): 1575-1579.
Wang X., Pereira J. H., Tsutakawa S., Fang X., Adams P. D., Mukhopadhyay A., and Lee T. S. (2021). Efficient production of oxidized terpenoids via engineering fusion proteins of terpene synthase and cytochrome P450. Metabolic Engineering, 64: 41-51.
Williams D., and De Luca V. (2023). Plant cytochrome P450s directing monoterpene indole alkaloid (MIA) and benzylisoquinoline alkaloid (BIA) biosynthesis. Phytochemistry Reviews, 22(2): 309-338.
Yang J., Yan R., Roy A., Xu D., Poisson J., and Zhang Y. (2015). The I-TASSER Suite: protein structure and function prediction. Nature Methods, 12(1): 7-8.
Zhou M.-Y., and Gomez-Sanchez C. E. (2000). Universal TA cloning. Current Issues in Molecular Biology, 2: 1-8.